Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
MXAN_1053Conserved hypothetical protein; Identified by match to protein family HMM PF04073. (182 aa)    
Predicted Functional Partners:
MXAN_1054
Hypothetical protein; Identified by Glimmer2; putative.
       0.479
MXAN_0780
Putative membrane protein; Identified by similarity to GB:AAR35804.1; match to protein family HMM PF01957.
 
     0.459
MXAN_1055
Hypothetical protein; Identified by Glimmer2; putative.
       0.422
Your Current Organism:
Myxococcus xanthus
NCBI taxonomy Id: 246197
Other names: M. xanthus DK 1622, Myxococcus xanthus DK 1622
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