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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
astBSuccinylarginine dihydrolase; Catalyzes the hydrolysis of N(2)-succinylarginine into N(2)- succinylornithine, ammonia and CO(2). (440 aa)    
Predicted Functional Partners:
MXAN_6454
Putative arginine N-succinyltransferase; Identified by similarity to SP:P76218.
 
 
 0.995
argD
Acetylornithine transaminase; Identified by similarity to SP:P54752; match to protein family HMM PF00202; match to protein family HMM TIGR00707; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. ArgD subfamily.
  
  
 0.584
rocD
Ornithine aminotransferase; Identified by similarity to SP:P38021; match to protein family HMM PF00202; match to protein family HMM TIGR01885; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
  
  
 0.584
MXAN_1057
Bacterial lipid A biosynthesis acyltransferase; Identified by match to protein family HMM PF03279.
       0.572
MXAN_1059
Hypothetical protein; Identified by Glimmer2; putative.
  
    0.551
MXAN_1058
Hypothetical protein; Identified by Glimmer2; putative.
       0.550
MXAN_1060
ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005.
       0.550
MXAN_0073
Identified by match to protein family HMM PF03061; match to protein family HMM TIGR00369.
  
     0.519
MXAN_0072
Identified by match to protein family HMM PF03061.
  
     0.504
MXAN_2473
Identified by match to protein family HMM PF00719.
  
     0.458
Your Current Organism:
Myxococcus xanthus
NCBI taxonomy Id: 246197
Other names: M. xanthus DK 1622, Myxococcus xanthus DK 1622
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