Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
MXAN_1221Hypothetical protein; Identified by Glimmer2; putative. (141 aa)    
Predicted Functional Partners:
MXAN_1222
Hypothetical protein; Identified by Glimmer2; putative.
       0.773
MXAN_1220
Hypothetical protein; Identified by Glimmer2; putative.
       0.752
MXAN_1223
Phage tail assembly chaperone.
       0.668
MXAN_1217
Hypothetical protein; Identified by Glimmer2; putative.
       0.634
MXAN_1218
Hypothetical protein; Identified by Glimmer2; putative.
       0.634
MXAN_1219
Hypothetical protein; Identified by Glimmer2; putative.
       0.634
MXAN_1216
Hypothetical protein; Identified by Glimmer2; putative.
       0.447
MXAN_1214
Putative phage prohead protease.
       0.437
MXAN_1215
Conserved hypothetical protein; Identified by similarity to GB:AAN69471.1.
       0.437
Your Current Organism:
Myxococcus xanthus
NCBI taxonomy Id: 246197
Other names: M. xanthus DK 1622, Myxococcus xanthus DK 1622
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