Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| MXAN_1310 | MXAN_1312 | MXAN_1310 | MXAN_1312 | Putative lipoprotein. | Hypothetical protein; Identified by Glimmer2; putative. | 0.532 |
| MXAN_1310 | MXAN_1313 | MXAN_1310 | MXAN_1313 | Putative lipoprotein. | Hypothetical protein; Identified by Glimmer2; putative. | 0.407 |
| MXAN_1310 | aat | MXAN_1310 | MXAN_1311 | Putative lipoprotein. | leucyl/phenylalanyl-tRNA--protein transferase; Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl- tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine. | 0.539 |
| MXAN_1312 | MXAN_1310 | MXAN_1312 | MXAN_1310 | Hypothetical protein; Identified by Glimmer2; putative. | Putative lipoprotein. | 0.532 |
| MXAN_1312 | MXAN_1313 | MXAN_1312 | MXAN_1313 | Hypothetical protein; Identified by Glimmer2; putative. | Hypothetical protein; Identified by Glimmer2; putative. | 0.572 |
| MXAN_1312 | aat | MXAN_1312 | MXAN_1311 | Hypothetical protein; Identified by Glimmer2; putative. | leucyl/phenylalanyl-tRNA--protein transferase; Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl- tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine. | 0.769 |
| MXAN_1313 | MXAN_1310 | MXAN_1313 | MXAN_1310 | Hypothetical protein; Identified by Glimmer2; putative. | Putative lipoprotein. | 0.407 |
| MXAN_1313 | MXAN_1312 | MXAN_1313 | MXAN_1312 | Hypothetical protein; Identified by Glimmer2; putative. | Hypothetical protein; Identified by Glimmer2; putative. | 0.572 |
| MXAN_1313 | aat | MXAN_1313 | MXAN_1311 | Hypothetical protein; Identified by Glimmer2; putative. | leucyl/phenylalanyl-tRNA--protein transferase; Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl- tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine. | 0.564 |
| MXAN_2885 | aat | MXAN_2885 | MXAN_1311 | Conserved hypothetical protein; Identified by similarity to GB:BAC70327.1. | leucyl/phenylalanyl-tRNA--protein transferase; Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl- tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine. | 0.453 |
| MXAN_5840 | aat | MXAN_5840 | MXAN_1311 | Prephenate dehydrogenase/chorismate mutase; Identified by match to protein family HMM PF01210; match to protein family HMM PF01817; match to protein family HMM PF02153; match to protein family HMM PF03446; match to protein family HMM PF03807. | leucyl/phenylalanyl-tRNA--protein transferase; Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl- tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine. | 0.514 |
| aat | MXAN_1310 | MXAN_1311 | MXAN_1310 | leucyl/phenylalanyl-tRNA--protein transferase; Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl- tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine. | Putative lipoprotein. | 0.539 |
| aat | MXAN_1312 | MXAN_1311 | MXAN_1312 | leucyl/phenylalanyl-tRNA--protein transferase; Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl- tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine. | Hypothetical protein; Identified by Glimmer2; putative. | 0.769 |
| aat | MXAN_1313 | MXAN_1311 | MXAN_1313 | leucyl/phenylalanyl-tRNA--protein transferase; Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl- tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine. | Hypothetical protein; Identified by Glimmer2; putative. | 0.564 |
| aat | MXAN_2885 | MXAN_1311 | MXAN_2885 | leucyl/phenylalanyl-tRNA--protein transferase; Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl- tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine. | Conserved hypothetical protein; Identified by similarity to GB:BAC70327.1. | 0.453 |
| aat | MXAN_5840 | MXAN_1311 | MXAN_5840 | leucyl/phenylalanyl-tRNA--protein transferase; Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl- tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine. | Prephenate dehydrogenase/chorismate mutase; Identified by match to protein family HMM PF01210; match to protein family HMM PF01817; match to protein family HMM PF02153; match to protein family HMM PF03446; match to protein family HMM PF03807. | 0.514 |
| aat | bpt | MXAN_1311 | MXAN_2360 | leucyl/phenylalanyl-tRNA--protein transferase; Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl- tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine. | Arginine-transferase family protein; Functions in the N-end rule pathway of protein degradation where it conjugates Leu from its aminoacyl-tRNA to the N-termini of proteins containing an N-terminal aspartate or glutamate. Belongs to the R-transferase family. Bpt subfamily. | 0.683 |
| aat | clpA | MXAN_1311 | MXAN_6026 | leucyl/phenylalanyl-tRNA--protein transferase; Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl- tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine. | ATP-dependent Clp protease, ATP-binding subunit ClpA; Identified by similarity to SP:P15716; match to protein family HMM PF00004; match to protein family HMM PF02861; match to protein family HMM PF07724; match to protein family HMM TIGR02639; Belongs to the ClpA/ClpB family. | 0.463 |
| aat | clpS | MXAN_1311 | MXAN_6025 | leucyl/phenylalanyl-tRNA--protein transferase; Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl- tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine. | ATP-dependent Clp protease adaptor protein ClpS; Involved in the modulation of the specificity of the ClpAP- mediated ATP-dependent protein degradation; Belongs to the ClpS family. | 0.839 |
| aat | lolA | MXAN_1311 | MXAN_1473 | leucyl/phenylalanyl-tRNA--protein transferase; Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl- tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine. | Outer membrane lipoprotein carrier protein LolA; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane). | 0.600 |
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