STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MXAN_1327Tetratricopeptide repeat protein; Identified by match to protein family HMM PF00515; match to protein family HMM PF07719. (1089 aa)    
Predicted Functional Partners:
MXAN_1330
FHA domain protein; Identified by match to protein family HMM PF00498.
 
    0.956
MXAN_1324
Tetratricopeptide repeat protein; Identified by match to protein family HMM PF00515; match to protein family HMM PF07719; match to protein family HMM PF07721.
 
 
 0.902
MXAN_1332
Hypothetical protein; Identified by Glimmer2; putative.
 
     0.871
MXAN_1333
Hypothetical protein; Identified by Glimmer2; putative.
 
    0.846
MXAN_1335
Putative lipoprotein.
 
    0.835
MXAN_1336
Putative lipoprotein.
 
    0.834
MXAN_1328
Conserved hypothetical protein.
  
   0.800
MXAN_1329
Conserved hypothetical protein.
       0.787
MXAN_1325
Putative lipoprotein.
  
    0.782
MXAN_6679
Hypothetical protein; Identified by Glimmer2; putative.
  
    0.779
Your Current Organism:
Myxococcus xanthus
NCBI taxonomy Id: 246197
Other names: M. xanthus DK 1622, Myxococcus xanthus DK 1622
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