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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MXAN_1360Conserved hypothetical protein; Identified by similarity to GB:AAS04148.1. (309 aa)    
Predicted Functional Partners:
MXAN_1359
Conserved hypothetical protein; Identified by similarity to GB:CAB59490.1.
   
0.916
MXAN_1361
FHA domain protein; Identified by match to protein family HMM PF00498.
  
    0.775
MXAN_2553
Conserved hypothetical protein; Identified by similarity to GB:CAE27706.1; match to protein family HMM PF08220.
  
     0.767
MXAN_1619
Conserved hypothetical protein; Identified by similarity to GB:AAN30633.1; match to protein family HMM PF08220.
  
     0.736
MXAN_1362
Identified by match to protein family HMM PF00614.
  
    0.644
pgsA
CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase; Identified by match to protein family HMM PF01066; match to protein family HMM TIGR00560; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
   
  
 0.640
bamD
Putative competence lipoprotein ComL; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane.
      
 0.541
MXAN_1358
Hypothetical protein; Identified by Glimmer2; putative.
       0.495
Your Current Organism:
Myxococcus xanthus
NCBI taxonomy Id: 246197
Other names: M. xanthus DK 1622, Myxococcus xanthus DK 1622
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