STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MXAN_1362Identified by match to protein family HMM PF00614. (453 aa)    
Predicted Functional Partners:
MXAN_0034
Hydrolase, haloacid dehalogenase-like family; Identified by match to protein family HMM PF00702.
     
  0.900
MXAN_1359
Conserved hypothetical protein; Identified by similarity to GB:CAB59490.1.
       0.644
MXAN_1360
Conserved hypothetical protein; Identified by similarity to GB:AAS04148.1.
  
    0.644
MXAN_1361
FHA domain protein; Identified by match to protein family HMM PF00498.
  
    0.643
MXAN_6753
Identified by match to protein family HMM PF00614.
  
     0.465
acnA
Aconitate hydratase 1; Catalyzes the isomerization of citrate to isocitrate via cis- aconitate.
       0.463
MXAN_1358
Hypothetical protein; Identified by Glimmer2; putative.
       0.421
MXAN_2715
Identified by match to protein family HMM PF03372.
 
    0.414
Your Current Organism:
Myxococcus xanthus
NCBI taxonomy Id: 246197
Other names: M. xanthus DK 1622, Myxococcus xanthus DK 1622
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.