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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MXAN_1389Putative alkaline phosphatase; Identified by similarity to SP:P42251; match to protein family HMM PF00245. (741 aa)    
Predicted Functional Partners:
MXAN_2955
Putative GTP cyclohydrolase I; Identified by similarity to SP:P19465; match to protein family HMM PF01227.
    
 0.927
MXAN_4112
FolB domain protein; Identified by similarity to SP:P31055; match to protein family HMM PF02152.
     
 0.912
MXAN_6868
Putative 6-pyruvoyl tetrahydrobiopterin synthase; Identified by match to protein family HMM PF01242.
     
  0.900
recA
recA protein; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family.
  
  
 0.517
MXAN_7299
Fatty acid desaturase family protein; Identified by match to protein family HMM PF00487.
  
     0.459
MXAN_1390
Acetyltransferase, GNAT family; Identified by match to protein family HMM PF00583.
       0.442
MXAN_6813
Conserved hypothetical protein.
 
     0.436
Your Current Organism:
Myxococcus xanthus
NCBI taxonomy Id: 246197
Other names: M. xanthus DK 1622, Myxococcus xanthus DK 1622
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