STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MXAN_1392Conserved hypothetical protein; Identified by similarity to GB:AAN48429.1. (374 aa)    
Predicted Functional Partners:
MXAN_1393
ATPase, histidine kinase-, DNA gyrase B-, and HSP90-like domain protein; Identified by match to protein family HMM PF02518.
 
 
 0.952
MXAN_4864
Hypothetical protein; Identified by Glimmer2; putative.
 
     0.665
MXAN_5466
Peptidase, S1E (streptogrisin A) subfamily; Identified by similarity to SP:Q05308; match to protein family HMM PF00089; match to protein family HMM PF00652.
 
     0.625
MXAN_6419
Tetratricopeptide repeat protein; Identified by match to protein family HMM PF00515; match to protein family HMM PF07719.
  
     0.597
MXAN_4134
Putative membrane protein.
  
     0.591
MXAN_6423
Putative membrane protein.
  
     0.578
MXAN_3046
Putative lipoprotein.
 
    0.573
MXAN_1005
FG-GAP repeat protein; Identified by match to protein family HMM PF01839.
 
    0.572
MXAN_2891
WGR domain protein; Identified by match to protein family HMM PF05406.
  
     0.569
MXAN_1395
Hypothetical protein; Identified by Glimmer2; putative.
 
    0.555
Your Current Organism:
Myxococcus xanthus
NCBI taxonomy Id: 246197
Other names: M. xanthus DK 1622, Myxococcus xanthus DK 1622
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.