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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MXAN_1405Oxidoreductase, short-chain dehydrogenase/reductase family; Identified by match to protein family HMM PF00106; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (348 aa)    
Predicted Functional Partners:
MXAN_3020
Conserved hypothetical protein; Identified by similarity to GB:BAC13022.1; match to protein family HMM PF00106; match to protein family HMM PF01073; match to protein family HMM PF01370; match to protein family HMM PF07993.
 
 
  
 0.897
MXAN_1406
Conserved hypothetical protein; Identified by similarity to PIR:H83982.
       0.741
MXAN_6877
Oxidoreductase, short-chain dehydrogenase/reductase family; Identified by match to protein family HMM PF00106.
  
 
   0.727
MXAN_0211
Oxidoreductase, short chain dehydrogenase/reductase family; Identified by match to protein family HMM PF00106.
  
 
   0.681
MXAN_0499
Hypothetical protein; Identified by Glimmer2; putative.
  
 
   0.594
MXAN_1407
Aminotransferase, classes I and II; Identified by match to protein family HMM PF00155; match to protein family HMM PF01053; match to protein family HMM PF01212.
  
    0.520
MXAN_0453
Putative general stress protein 26; Identified by similarity to SP:P80238; match to protein family HMM PF01243.
 
    0.452
MXAN_3779
Non-ribosomal peptide synthetase/polyketide synthase; Identified by similarity to GB:AAF15891.2; match to protein family HMM PF00109; match to protein family HMM PF00296; match to protein family HMM PF00501; match to protein family HMM PF00550; match to protein family HMM PF00668; match to protein family HMM PF00698; match to protein family HMM PF00975; match to protein family HMM PF02801; match to protein family HMM TIGR01733.
  
 
 0.451
MXAN_3462
Polyketide synthase type I; Identified by match to protein family HMM PF00106; match to protein family HMM PF00109; match to protein family HMM PF00698; match to protein family HMM PF02801.
  
 
 0.445
MXAN_0238
Hypothetical protein; Identified by Glimmer2; putative.
  
    0.439
Your Current Organism:
Myxococcus xanthus
NCBI taxonomy Id: 246197
Other names: M. xanthus DK 1622, Myxococcus xanthus DK 1622
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