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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MXAN_1485Putative cytochrome c. (202 aa)    
Predicted Functional Partners:
MXAN_1611
Cytochrome c family protein.
 
  
 0.785
MXAN_1569
Putative cytochrome c.
  
     0.770
MXAN_1484
ClpA/B family protein; Identified by similarity to SP:Q9RA63; match to protein family HMM PF07724; Belongs to the ClpA/ClpB family.
       0.661
MXAN_0160
Oxidoreductase, molybdopterin-binding; Identified by match to protein family HMM PF00174.
 
 
 
 0.478
MXAN_5219
Oxidoreductase, molybdopterin-binding; Identified by match to protein family HMM PF00174.
   
 
 0.434
MXAN_1341
Conserved hypothetical protein; Identified by similarity to PIR:G83362.
 
     0.426
Your Current Organism:
Myxococcus xanthus
NCBI taxonomy Id: 246197
Other names: M. xanthus DK 1622, Myxococcus xanthus DK 1622
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