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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ahpDPutative alkyl hydroperoxide reductase D; Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity. Belongs to the AhpD family. (174 aa)    
Predicted Functional Partners:
ahpC
Alkyl hydroperoxide reductase C; Identified by similarity to GB:AAC61301.1; match to protein family HMM PF00578.
 
  
 0.973
pdhB
Pyruvate dehydrogenase complex, E1 component, pyruvate dehydrogenase, beta subunit; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO2.
      
 0.780
pdhC
Pyruvate dehydrogenase complex, E2 component, dihydrolipoamide acetyltransferase; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2).
   
  
 0.650
MXAN_1073
Hsp33 family protein; Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress; Belongs to the HSP33 family.
      
 0.641
dpbF
DNA polymerase domain protein.
      
 0.634
MXAN_1562
Dps family protein; Identified by similarity to PDB:1O9R_A; match to protein family HMM PF00210; Belongs to the Dps family.
     
 0.498
MXAN_1561
Putative lipoprotein.
       0.493
MXAN_1560
Aminotransferase, class I; Identified by match to protein family HMM PF00155.
       0.400
Your Current Organism:
Myxococcus xanthus
NCBI taxonomy Id: 246197
Other names: M. xanthus DK 1622, Myxococcus xanthus DK 1622
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