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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MXAN_1591Hypothetical protein; Identified by Glimmer2; putative. (1161 aa)    
Predicted Functional Partners:
MXAN_1592
Hypothetical protein; Identified by Glimmer2; putative.
       0.753
MXAN_1593
Hypothetical protein; Identified by Glimmer2; putative.
  
    0.753
MXAN_0142
WD domain G-beta repeat/PBS lyase HEAT-like repeat protein; Identified by match to protein family HMM PF00400; match to protein family HMM PF02985; match to protein family HMM PF03130.
  
     0.745
MXAN_3999
Putative N-acetylmuramoyl-L-alanine amidase; Identified by match to protein family HMM PF01520.
 
     0.720
MXAN_2353
Putative oligopeptide transporter; Identified by match to protein family HMM PF03169.
 
     0.716
MXAN_0621
Conserved hypothetical protein.
  
     0.685
MXAN_1580
Identified by match to protein family HMM PF03372.
  
     0.682
MXAN_5849
WGR domain protein; Identified by match to protein family HMM PF05406.
  
     0.672
MXAN_1003
Tat (twin-arginine translocation) pathway signal sequence domain protein; Identified by match to protein family HMM TIGR01409.
  
     0.666
MXAN_3973
Hypothetical protein; Identified by Glimmer2; putative.
  
     0.631
Your Current Organism:
Myxococcus xanthus
NCBI taxonomy Id: 246197
Other names: M. xanthus DK 1622, Myxococcus xanthus DK 1622
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