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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MXAN_1595Conserved hypothetical protein; Identified by similarity to GB:BAC90391.1; match to protein family HMM PF01370. (315 aa)    
Predicted Functional Partners:
MXAN_1596
Acyltransferase domain protein; Identified by match to protein family HMM PF01553.
 
    0.948
MXAN_1048
UDP-glucose 6-dehydrogenase; Identified by similarity to GB:AAQ62125.1; match to protein family HMM PF00984; match to protein family HMM PF01210; match to protein family HMM PF03720; match to protein family HMM PF03721.
  
 0.939
MXAN_4027
Conserved hypothetical protein; Identified by similarity to GB:BAC72444.1; match to protein family HMM PF01073; match to protein family HMM PF01370.
  
  
 
0.927
MXAN_1947
Putative UDP-glucose 4-epimerase; Identified by match to protein family HMM PF01073; match to protein family HMM PF01370.
  
  
 
0.915
galU
UTP-glucose-1-phosphate uridylyltransferase; Identified by match to protein family HMM PF00483; match to protein family HMM TIGR01099.
  
 
 0.908
galE
UDP-glucose 4-epimerase; Identified by match to protein family HMM PF00106; match to protein family HMM PF01073; match to protein family HMM PF01370; match to protein family HMM PF02719; match to protein family HMM PF04321; match to protein family HMM PF07993.
     
  0.900
MXAN_1946
Acyltransferase domain protein; Identified by match to protein family HMM PF01553.
 
    0.773
MXAN_4028
Putative acyltransferase; Identified by match to protein family HMM PF01553.
 
    0.759
MXAN_1594
FAD-binding monooxygenase, PheA/TfdB family; Identified by match to protein family HMM PF01494.
  
 
 0.709
MXAN_5625
Putative membrane protein.
 
  
 0.629
Your Current Organism:
Myxococcus xanthus
NCBI taxonomy Id: 246197
Other names: M. xanthus DK 1622, Myxococcus xanthus DK 1622
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