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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MXAN_1600Aminotransferase, classs I; Identified by match to protein family HMM PF00155. (388 aa)    
Predicted Functional Partners:
MXAN_1599
Putative methyltransferase; Identified by match to protein family HMM PF00891.
  
    0.719
MXAN_1598
ABC transporter, permease protein, ABC-2 family; Identified by match to protein family HMM PF01061.
  
  
 0.692
MXAN_1597
ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005.
       0.685
MXAN_0971
Aspartate kinase/homoserine dehydrogenase; Identified by similarity to SP:P00561; match to protein family HMM PF00696; match to protein family HMM PF00742; match to protein family HMM PF03447; match to protein family HMM TIGR00657.
  
 
 0.535
MXAN_2278
Aspartate kinase/homoserine dehydrogenase; Identified by similarity to SP:P00561; match to protein family HMM PF00696; match to protein family HMM PF00742; match to protein family HMM PF01842; match to protein family HMM PF03447; match to protein family HMM TIGR00657.
  
 
 0.535
MXAN_1596
Acyltransferase domain protein; Identified by match to protein family HMM PF01553.
     
 0.522
MXAN_1595
Conserved hypothetical protein; Identified by similarity to GB:BAC90391.1; match to protein family HMM PF01370.
     
 0.514
MXAN_3917
Glutamate synthase, large subunit; Identified by similarity to SP:P39812; similarity to SP:P55037; match to protein family HMM PF00310; match to protein family HMM PF00478; match to protein family HMM PF01493; match to protein family HMM PF01645; match to protein family HMM PF04898.
  
  
 0.459
MXAN_1594
FAD-binding monooxygenase, PheA/TfdB family; Identified by match to protein family HMM PF01494.
  
  
 0.458
MXAN_3779
Non-ribosomal peptide synthetase/polyketide synthase; Identified by similarity to GB:AAF15891.2; match to protein family HMM PF00109; match to protein family HMM PF00296; match to protein family HMM PF00501; match to protein family HMM PF00550; match to protein family HMM PF00668; match to protein family HMM PF00698; match to protein family HMM PF00975; match to protein family HMM PF02801; match to protein family HMM TIGR01733.
  
  
 0.439
Your Current Organism:
Myxococcus xanthus
NCBI taxonomy Id: 246197
Other names: M. xanthus DK 1622, Myxococcus xanthus DK 1622
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