STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MXAN_1610Iron-sulfur cluster-binding protein, Rieske family; Identified by match to protein family HMM PF00355. (332 aa)    
Predicted Functional Partners:
MXAN_3856
Iron-sulfur cluster-binding protein, Rieske family; Identified by match to protein family HMM PF00355.
  
     0.774
MXAN_1609
Hypothetical protein; Identified by Glimmer2; putative.
       0.773
MXAN_1611
Cytochrome c family protein.
       0.737
MXAN_7205
Putative phthalate dioxygenase reductase; Identified by similarity to SP:P33164; match to protein family HMM PF00111; match to protein family HMM PF00175; match to protein family HMM PF00970.
 
  
 0.732
MXAN_1612
Hypothetical protein; Identified by Glimmer2; putative.
       0.558
MXAN_1613
Hypothetical protein; Identified by Glimmer2; putative.
       0.558
MXAN_0925
Putative 4-oxalocrotonate decarboxylase; Identified by similarity to SP:P49156; match to protein family HMM PF01689.
 
  
 0.557
MXAN_1608
Hypothetical protein; Identified by Glimmer2; putative.
       0.542
MXAN_4919
Identified by match to protein family HMM PF00067; Belongs to the cytochrome P450 family.
 
  
 0.529
MXAN_0950
Conserved hypothetical protein; Identified by similarity to GB:BAC50880.1; match to protein family HMM PF08028.
  
   
 0.463
Your Current Organism:
Myxococcus xanthus
NCBI taxonomy Id: 246197
Other names: M. xanthus DK 1622, Myxococcus xanthus DK 1622
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.