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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MXAN_1706Kelch domain protein; Identified by match to protein family HMM PF01344; match to protein family HMM PF07646. (440 aa)    
Predicted Functional Partners:
MXAN_1707
Hypothetical protein; Identified by Glimmer2; putative.
       0.773
MXAN_1708
Hypothetical protein; Identified by Glimmer2; putative.
       0.671
MXAN_4937
EGF domain protein; Identified by match to protein family HMM PF00008; match to protein family HMM PF07645; match to protein family HMM TIGR02232.
  
     0.653
MXAN_1705
Hypothetical protein; Identified by Glimmer2; putative.
       0.572
MXAN_3744
Hypothetical protein; Identified by Glimmer2; putative.
  
    0.545
MXAN_7091
HAD superfamily (subfamily IG) hydrolase, 5'-nucleotidase; Identified by similarity to GB:AAC48784.1; match to protein family HMM PF05761; match to protein family HMM TIGR02244.
  
     0.525
MXAN_1709
Putative DNA-binding regulatory protein; Identified by match to protein family HMM TIGR02233; match to protein family HMM TIGR02937.
       0.503
pkn8
Serine/threonine kinase PKN8; Identified by similarity to SP:P33973; match to protein family HMM PF00069; match to protein family HMM PF00515; match to protein family HMM PF07719; match to protein family HMM PF07721.
       0.503
MXAN_4430
Hypothetical protein; Identified by Glimmer2; putative.
  
     0.502
MXAN_3709
HAD superfamily (subfamily IG) hydrolase, 5'-nucleotidase; Identified by similarity to GB:AAC48784.1; match to protein family HMM PF05761; match to protein family HMM TIGR02244.
  
     0.500
Your Current Organism:
Myxococcus xanthus
NCBI taxonomy Id: 246197
Other names: M. xanthus DK 1622, Myxococcus xanthus DK 1622
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