MXAN_1713 protein (Myxococcus xanthus) - STRING interaction network

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Score

MXAN_1713

Peptidyl-prolyl cis-trans isomerase, FKBP-type domain protein; Identified by match to protein family HMM PF00254. (364 aa)

Predicted Functional Partners:

rpsG

0.857

rplW

0.842

rpsA

0.840

rpmC

0.814

rplX

0.810

rplC

0.796

rplU

0.794

rpsB

0.793

rpsJ

0.789

rplF

0.781

Your Current Organism:

Myxococcus xanthus

NCBI taxonomy Id: 246197
Other names: M. xanthus DK 1622, Myxococcus xanthus DK 1622

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
MXAN_1713	rplC	MXAN_1713	MXAN_3370	Peptidyl-prolyl cis-trans isomerase, FKBP-type domain protein; Identified by match to protein family HMM PF00254.	Ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family.	0.796
MXAN_1713	rplF	MXAN_1713	MXAN_3314	Peptidyl-prolyl cis-trans isomerase, FKBP-type domain protein; Identified by match to protein family HMM PF00254.	Ribosomal protein L6; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center; Belongs to the universal ribosomal protein uL6 family.	0.781
MXAN_1713	rplU	MXAN_1713	MXAN_1469	Peptidyl-prolyl cis-trans isomerase, FKBP-type domain protein; Identified by match to protein family HMM PF00254.	Ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	0.794
MXAN_1713	rplW	MXAN_1713	MXAN_3301	Peptidyl-prolyl cis-trans isomerase, FKBP-type domain protein; Identified by match to protein family HMM PF00254.	Ribosomal protein L23; One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome; Belongs to the universal ribosomal protein uL23 family.	0.842
MXAN_1713	rplX	MXAN_1713	MXAN_3310	Peptidyl-prolyl cis-trans isomerase, FKBP-type domain protein; Identified by match to protein family HMM PF00254.	Ribosomal protein L24; One of two assembly initiator proteins, it binds directly to the 5'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit.	0.810
MXAN_1713	rpmC	MXAN_1713	MXAN_3307	Peptidyl-prolyl cis-trans isomerase, FKBP-type domain protein; Identified by match to protein family HMM PF00254.	Ribosomal protein L29; Identified by similarity to SP:P04457; match to protein family HMM PF00831; match to protein family HMM TIGR00012; Belongs to the universal ribosomal protein uL29 family.	0.814
MXAN_1713	rpsA	MXAN_1713	MXAN_3793	Peptidyl-prolyl cis-trans isomerase, FKBP-type domain protein; Identified by match to protein family HMM PF00254.	Ribosomal protein S1; Binds mRNA; thus facilitating recognition of the initiation point. It is needed to translate mRNA with a short Shine-Dalgarno (SD) purine-rich sequence.	0.840
MXAN_1713	rpsB	MXAN_1713	MXAN_5344	Peptidyl-prolyl cis-trans isomerase, FKBP-type domain protein; Identified by match to protein family HMM PF00254.	Ribosomal protein S2; Identified by similarity to SP:P21464; match to protein family HMM PF00318; match to protein family HMM TIGR01011; Belongs to the universal ribosomal protein uS2 family.	0.793
MXAN_1713	rpsG	MXAN_1713	MXAN_3296	Peptidyl-prolyl cis-trans isomerase, FKBP-type domain protein; Identified by match to protein family HMM PF00254.	Ribosomal protein S7; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA; Belongs to the universal ribosomal protein uS7 family.	0.857
MXAN_1713	rpsJ	MXAN_1713	MXAN_3299	Peptidyl-prolyl cis-trans isomerase, FKBP-type domain protein; Identified by match to protein family HMM PF00254.	Ribosomal protein S10; Involved in the binding of tRNA to the ribosomes. Belongs to the universal ribosomal protein uS10 family.	0.789
rplC	MXAN_1713	MXAN_3370	MXAN_1713	Ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family.	Peptidyl-prolyl cis-trans isomerase, FKBP-type domain protein; Identified by match to protein family HMM PF00254.	0.796
rplC	rplF	MXAN_3370	MXAN_3314	Ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family.	Ribosomal protein L6; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center; Belongs to the universal ribosomal protein uL6 family.	0.999
rplC	rplU	MXAN_3370	MXAN_1469	Ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family.	Ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	0.986
rplC	rplW	MXAN_3370	MXAN_3301	Ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family.	Ribosomal protein L23; One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome; Belongs to the universal ribosomal protein uL23 family.	0.998
rplC	rplX	MXAN_3370	MXAN_3310	Ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family.	Ribosomal protein L24; One of two assembly initiator proteins, it binds directly to the 5'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit.	0.993
rplC	rpmC	MXAN_3370	MXAN_3307	Ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family.	Ribosomal protein L29; Identified by similarity to SP:P04457; match to protein family HMM PF00831; match to protein family HMM TIGR00012; Belongs to the universal ribosomal protein uL29 family.	0.992
rplC	rpsA	MXAN_3370	MXAN_3793	Ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family.	Ribosomal protein S1; Binds mRNA; thus facilitating recognition of the initiation point. It is needed to translate mRNA with a short Shine-Dalgarno (SD) purine-rich sequence.	0.908
rplC	rpsB	MXAN_3370	MXAN_5344	Ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family.	Ribosomal protein S2; Identified by similarity to SP:P21464; match to protein family HMM PF00318; match to protein family HMM TIGR01011; Belongs to the universal ribosomal protein uS2 family.	0.993
rplC	rpsG	MXAN_3370	MXAN_3296	Ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family.	Ribosomal protein S7; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA; Belongs to the universal ribosomal protein uS7 family.	0.991
rplC	rpsJ	MXAN_3370	MXAN_3299	Ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family.	Ribosomal protein S10; Involved in the binding of tRNA to the ribosomes. Belongs to the universal ribosomal protein uS10 family.	0.999