STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MXAN_1726Transcriptional regulator, LysR family; Identified by match to protein family HMM PF00126; match to protein family HMM PF03466; Belongs to the LysR transcriptional regulatory family. (293 aa)    
Predicted Functional Partners:
MXAN_6167
Transcriptional regulator, LysR family; Identified by match to protein family HMM PF00126; match to protein family HMM PF03466; Belongs to the LysR transcriptional regulatory family.
  
     0.754
MXAN_4060
Transcriptional regulator, AraC family; Identified by match to protein family HMM PF00165.
  
    0.507
MXAN_6129
Transcriptional regulator, LysR family; Identified by match to protein family HMM PF00126; Belongs to the LysR transcriptional regulatory family.
  
     0.492
MXAN_6157
Transcriptional regulator, LysR family; Identified by match to protein family HMM PF00126; match to protein family HMM PF03466; Belongs to the LysR transcriptional regulatory family.
  
     0.480
MXAN_7456
Conserved hypothetical protein; Identified by similarity to GB:AAL56580.1.
  
     0.456
MXAN_1742
Fatty acid desaturase family protein; Identified by match to protein family HMM PF00487.
  
     0.444
MXAN_1748
Acetyltransferase, GNAT family; Identified by match to protein family HMM PF00583.
  
     0.438
MXAN_6270
Hypothetical protein; Identified by Glimmer2; putative.
  
     0.433
MXAN_0366
Identified by match to protein family HMM PF03372.
  
     0.420
MXAN_3917
Glutamate synthase, large subunit; Identified by similarity to SP:P39812; similarity to SP:P55037; match to protein family HMM PF00310; match to protein family HMM PF00478; match to protein family HMM PF01493; match to protein family HMM PF01645; match to protein family HMM PF04898.
  
  
 0.417
Your Current Organism:
Myxococcus xanthus
NCBI taxonomy Id: 246197
Other names: M. xanthus DK 1622, Myxococcus xanthus DK 1622
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.