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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MXAN_1741The M23 peptidase metal-binding motif is not conserved, but the HXH active site is; identified by match to protein family HMM PF01551; match to protein family HMM TIGR01409. (452 aa)    
Predicted Functional Partners:
MXAN_3554
M23 peptidase metal-binding motif and HXH active site are conserved; identified by match to protein family HMM PF01551.
  
     0.748
MXAN_6905
M23 peptidase domain protein; Identified by match to protein family HMM PF01551.
  
     0.700
MXAN_2713
M23 peptidase metal-binding motif and HXH active site are conserved; identified by match to protein family HMM PF01551.
  
     0.673
MXAN_2075
M23 peptidase metal-binding motif and HXH active site are conserved; identified by match to protein family HMM PF01551.
  
     0.658
MXAN_4449
Cell wall peptidase, M23 family; Identified by match to protein family HMM PF01476; match to protein family HMM PF01551.
  
     0.649
MXAN_1433
M23 peptidase metal-binding motif and HXH active site are conserved; identified by match to protein family HMM PF01551.
  
     0.642
MXAN_5348
M23 peptidase metal-binding motif and HXH active site are conserved; identified by match to protein family HMM PF01551.
  
     0.627
MXAN_5746
M23 peptidase domain protein; Lacks the M23 metal-binding motif and HXH active site. This is characteristic of nonpeptidase members of the M23 family; identified by match to protein family HMM PF01551.
 
   
 0.579
MXAN_2445
Type III secretion system apparatus protein YscQ/HrcQ; Identified by match to protein family HMM PF01052; match to protein family HMM TIGR02551.
  
 
 0.528
MXAN_5649
Type III secretion system apparatus protein YscQ/HrcQ; Identified by match to protein family HMM PF01052; match to protein family HMM TIGR02551.
   
 
 0.479
Your Current Organism:
Myxococcus xanthus
NCBI taxonomy Id: 246197
Other names: M. xanthus DK 1622, Myxococcus xanthus DK 1622
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