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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pepProlyl endopeptidase precursor Pep; Identified by similarity to SP:Q06903. (689 aa)    
Predicted Functional Partners:
dpp4
Dipeptidyl peptidase IV; Identified by similarity to GB:BAA11872.1; match to protein family HMM PF00326; match to protein family HMM PF00930.
  
   
 0.854
MXAN_1691
Hydrolase, alpha/beta fold family; Identified by match to protein family HMM PF00561.
      
 0.550
pip
Proline iminopeptidase; Identified by similarity to SP:P52279; match to protein family HMM PF00561; match to protein family HMM TIGR01249; Belongs to the peptidase S33 family.
      
 0.548
MXAN_0100
Peptidase, M28D (aminopeptidase ES-62) subfamily; Identified by similarity to GB:AAC28365.1; similarity to GB:AAD31418.1; match to protein family HMM PF01546; match to protein family HMM PF04389.
  
     0.502
MXAN_6601
Peptidase, S9C (acylaminoacyl-peptidase) subfamily; Identified by match to protein family HMM PF00326; match to protein family HMM PF07676.
  
    0.473
MXAN_2860
Conserved hypothetical protein; Identified by match to protein family HMM PF05960.
 
    0.455
lon
ATP-dependent protease La; ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short- lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner.
  
    0.447
MXAN_1682
Peptidase, S9B (dipeptidyl peptidase IV) subfamily; Identified by similarity to GB:BAA11872.1; match to protein family HMM PF00326; match to protein family HMM PF00930.
  
     0.445
clpX
ATP-dependent Clp protease, ATP-binding subunit ClpX; ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP.
       0.408
Your Current Organism:
Myxococcus xanthus
NCBI taxonomy Id: 246197
Other names: M. xanthus DK 1622, Myxococcus xanthus DK 1622
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