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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MXAN_2048Hypothetical protein; Identified by Glimmer2; putative. (196 aa)    
Predicted Functional Partners:
MXAN_5278
Hypothetical protein; Identified by Glimmer2; putative.
  
     0.689
lpxA
acyl-[acyl-carrier-protein]--UDP-N- acetylglucosamine O-acyltransferase; Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell.
  
 
 0.676
MXAN_4727
Outer membrane protein, OmpH family; Identified by match to protein family HMM PF03938.
  
  
 0.588
MXAN_1696
Bacterial Ig-like domain protein; Identified by match to protein family HMM PF02369.
  
    0.578
MXAN_6394
Identified by match to protein family HMM PF00753.
 
    0.497
ribBA
3,4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohydrolase II; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; Belongs to the DHBP synthase family.
   
 
 0.444
MXAN_2492
Conserved domain protein; Identified by similarity to PIR:T17451.
  
     0.441
gutQ
GutQ protein; Identified by similarity to SP:P17115; match to protein family HMM PF00571; match to protein family HMM PF01380; match to protein family HMM TIGR00393; Belongs to the SIS family. GutQ/KpsF subfamily.
  
  
 0.441
MXAN_3856
Iron-sulfur cluster-binding protein, Rieske family; Identified by match to protein family HMM PF00355.
  
     0.421
MXAN_2252
Putative arginine kinase; Identified by similarity to SP:P51541; Belongs to the ATP:guanido phosphotransferase family.
 
     0.420
Your Current Organism:
Myxococcus xanthus
NCBI taxonomy Id: 246197
Other names: M. xanthus DK 1622, Myxococcus xanthus DK 1622
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