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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MXAN_2115Transposition helper protein, IS21 family, truncated; Identified by match to protein family HMM PF01695. (224 aa)    
Predicted Functional Partners:
MXAN_3613
Transposase, IS21 family; Identified by similarity to GB:AAO58991.1; match to protein family HMM PF00665.
 
  
 0.799
MXAN_2168
Transposase, IS21 family; Identified by similarity to GB:AAO56339.1; match to protein family HMM PF00665.
  
 0.794
MXAN_3612
Transposase, IS21 family; Identified by match to protein family HMM PF00665.
  
 0.794
MXAN_6285
Transposase, IS21 family; Identified by similarity to GB:AAO56339.1; match to protein family HMM PF00665.
  
 0.794
dnaB
Replicative DNA helicase; Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity and contains distinct active sites for ATP binding, DNA binding, and interaction with DnaC protein, primase, and other prepriming proteins. Belongs to the helicase family. DnaB subfamily.
  
 
 0.627
MXAN_2113
Conserved hypothetical protein; Identified by similarity to GB:AAS00436.1; match to protein family HMM PF03928.
       0.418
Your Current Organism:
Myxococcus xanthus
NCBI taxonomy Id: 246197
Other names: M. xanthus DK 1622, Myxococcus xanthus DK 1622
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