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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MXAN_2151Conserved hypothetical protein. (205 aa)    
Predicted Functional Partners:
MXAN_2152
Oxidoreductase, zinc-binding dehydrogenase family; Identified by match to protein family HMM PF00107.
       0.773
MXAN_5938
Conserved hypothetical protein.
  
     0.578
MXAN_5406
Conserved hypothetical protein; Identified by similarity to GB:BAC52018.1.
  
     0.507
MXAN_5471
Glutathione S-transferase domain protein; Identified by match to protein family HMM PF02798.
  
     0.494
MXAN_1685
Conserved hypothetical protein.
  
     0.448
MXAN_3096
Conserved hypothetical protein; Identified by similarity to GB:AAK25388.1; match to protein family HMM PF04944.
  
     0.426
MXAN_4682
Conserved hypothetical protein; Identified by similarity to GB:CAD14295.1; match to protein family HMM PF01904.
  
     0.423
MXAN_2235
Putative membrane protein; Identified by match to protein family HMM PF01925.
  
     0.408
Your Current Organism:
Myxococcus xanthus
NCBI taxonomy Id: 246197
Other names: M. xanthus DK 1622, Myxococcus xanthus DK 1622
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