Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-occurrence
Co-expression
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[Homology]
Score
MXAN_2154NADP oxidoreductase, coenzyme F420-dependent; Identified by match to protein family HMM PF03446; match to protein family HMM PF03807. (295 aa)    
Predicted Functional Partners:
MXAN_2155
Hypothetical protein; Identified by Glimmer2; putative.
       0.603
MXAN_2156
Putative serine/threonine protein kinase; Identified by match to protein family HMM PF00069.
       0.603
MXAN_3659
Identified by match to protein family HMM PF00903.
 
     0.505
MXAN_1005
FG-GAP repeat protein; Identified by match to protein family HMM PF01839.
  
     0.435
MXAN_2224
Hypothetical protein; Identified by Glimmer2; putative.
 
     0.402
MXAN_2794
Transcriptional regulator, TetR family; Identified by match to protein family HMM PF00440; match to protein family HMM PF02909.
  
     0.402
Your Current Organism:
Myxococcus xanthus
NCBI taxonomy Id: 246197
Other names: M. xanthus DK 1622, Myxococcus xanthus DK 1622
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