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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MXAN_2194Putative lipoprotein. (249 aa)    
Predicted Functional Partners:
MXAN_5485
Conserved hypothetical protein; Identified by similarity to PIR:F69459.
  
    0.675
MXAN_3638
Peptidase, M19 family; Identified by match to protein family HMM PF01244.
  
    0.631
MXAN_0569
Hypothetical protein; Identified by Glimmer2; putative.
  
     0.615
MXAN_0345
Putative N-acetylmuramoyl-L-alanine amidase; Identified by match to protein family HMM PF01510.
  
     0.594
MXAN_2366
Putative lipoprotein.
  
     0.589
MXAN_2873
NHL repeat domain protein; Identified by match to protein family HMM PF01436.
  
     0.547
MXAN_0525
Putative serine/threonine protein kinase; Identified by match to protein family HMM PF00069; match to protein family HMM PF03781.
  
     0.545
MXAN_2354
Identified by match to protein family HMM PF00753.
  
     0.545
MXAN_0142
WD domain G-beta repeat/PBS lyase HEAT-like repeat protein; Identified by match to protein family HMM PF00400; match to protein family HMM PF02985; match to protein family HMM PF03130.
  
     0.542
MXAN_5304
Hypothetical protein; Identified by Glimmer2; putative.
  
     0.540
Your Current Organism:
Myxococcus xanthus
NCBI taxonomy Id: 246197
Other names: M. xanthus DK 1622, Myxococcus xanthus DK 1622
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