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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MXAN_2221Peptidase, M27 (PrtB) family; Identified by similarity to GB:CAA71521.1. (254 aa)    
Predicted Functional Partners:
MXAN_2220
Hypothetical protein; Identified by Glimmer2; putative.
       0.762
MXAN_7288
Conserved hypothetical protein.
  
     0.735
MXAN_7140
Glycosyl hydrolase, family 15.
 
    0.693
MXAN_2354
Identified by match to protein family HMM PF00753.
  
     0.690
MXAN_6984
Acetyltransferase, GNAT family; Identified by match to protein family HMM PF00583.
  
    0.637
MXAN_2222
Identified by match to protein family HMM PF03372.
 
     0.625
MXAN_1697
Conserved hypothetical protein; Identified by similarity to GB:AAK22543.1.
  
     0.595
MXAN_7080
Conserved hypothetical protein.
  
    0.584
MXAN_5918
Conserved hypothetical protein.
  
     0.506
MXAN_3810
Hydrolase, CocE/NonD family; Identified by match to protein family HMM PF02129; match to protein family HMM TIGR00976.
  
     0.501
Your Current Organism:
Myxococcus xanthus
NCBI taxonomy Id: 246197
Other names: M. xanthus DK 1622, Myxococcus xanthus DK 1622
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.