STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MXAN_2234Transcriptional regulator, TetR family; Identified by match to protein family HMM PF00440. (182 aa)    
Predicted Functional Partners:
MXAN_2233
Major facilitator family transporter; Identified by match to protein family HMM PF07690.
 
  
 0.944
MXAN_5466
Peptidase, S1E (streptogrisin A) subfamily; Identified by similarity to SP:Q05308; match to protein family HMM PF00089; match to protein family HMM PF00652.
  
     0.569
lepB
Signal peptidase I; Identified by match to protein family HMM PF00717; match to protein family HMM TIGR02227; Belongs to the peptidase S26 family.
   
    0.533
MXAN_0277
Putative membrane protein.
   
    0.525
phoU
Phosphate transport system regulatory protein PhoU; Plays a role in the regulation of phosphate uptake.
   
    0.522
MXAN_0892
NAD dependent epimerase/dehydratase family protein; Identified by match to protein family HMM PF01073; match to protein family HMM PF01370; match to protein family HMM PF07993; match to protein family HMM TIGR01777.
  
    0.509
MXAN_1546
Conserved hypothetical protein; Identified by similarity to GB:CAG35984.1; match to protein family HMM PF01073; match to protein family HMM PF01370; match to protein family HMM PF07993; match to protein family HMM TIGR01777.
  
    0.509
MXAN_5157
Conserved hypothetical protein; Identified by similarity to GB:AAL22880.1.
  
     0.479
MXAN_2224
Hypothetical protein; Identified by Glimmer2; putative.
  
     0.474
rimO
MiaB-like tRNA modifying enzyme YliG, TIGR01125; Catalyzes the methylthiolation of an aspartic acid residue of ribosomal protein S12; Belongs to the methylthiotransferase family. RimO subfamily.
   
    0.445
Your Current Organism:
Myxococcus xanthus
NCBI taxonomy Id: 246197
Other names: M. xanthus DK 1622, Myxococcus xanthus DK 1622
Server load: low (30%) [HD]