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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MXAN_2253Putative peptidase, S37 family; Identified by match to protein family HMM PF05576. (661 aa)    
Predicted Functional Partners:
MXAN_6247
Terpene synthase, metal binding domain protein; Identified by match to protein family HMM PF03936.
  
     0.572
MXAN_2254
Conserved domain protein; Identified by similarity to GB:AAO79513.1.
  
    0.547
MXAN_0079
Transcriptional regulator, TetR family; Identified by match to protein family HMM PF00440.
  
     0.526
MXAN_2741
Conserved domain protein; Identified by similarity to GB:BAC16869.1.
  
     0.498
MXAN_5000
SPFH domain/band 7 family.
  
     0.490
MXAN_6248
Cyclic nucleotide-binding domain protein; Identified by match to protein family HMM PF00027.
  
     0.453
MXAN_0679
Hypothetical protein; Identified by Glimmer2; putative.
  
     0.450
MXAN_1237
Acetyltransferase, GNAT family; Identified by match to protein family HMM PF00583.
  
     0.430
MXAN_6249
Cyclic nucleotide-binding domain protein; Identified by match to protein family HMM PF00027.
  
     0.424
MXAN_3638
Peptidase, M19 family; Identified by match to protein family HMM PF01244.
  
     0.421
Your Current Organism:
Myxococcus xanthus
NCBI taxonomy Id: 246197
Other names: M. xanthus DK 1622, Myxococcus xanthus DK 1622
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