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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MXAN_2254Conserved domain protein; Identified by similarity to GB:AAO79513.1. (539 aa)    
Predicted Functional Partners:
MXAN_2297
Conserved hypothetical protein; Identified by similarity to PIR:AH2368.
  
     0.693
MXAN_0940
Conserved hypothetical protein; Identified by match to protein family HMM TIGR02231.
  
     0.671
MXAN_2936
Putative lipoprotein.
  
     0.653
MXAN_2932
Putative lipoprotein.
  
     0.643
MXAN_2933
Putative lipoprotein.
  
     0.630
MXAN_6260
SWIM zinc finger domain protein; Identified by match to protein family HMM PF04434.
  
     0.628
MXAN_2849
Hypothetical protein; Identified by Glimmer2; putative.
  
    0.625
MXAN_5969
Conserved hypothetical protein.
  
     0.624
MXAN_4798
Conserved domain protein.
  
     0.620
MXAN_6958
Fatty acid desaturase family protein; Identified by match to protein family HMM PF00487.
  
     0.589
Your Current Organism:
Myxococcus xanthus
NCBI taxonomy Id: 246197
Other names: M. xanthus DK 1622, Myxococcus xanthus DK 1622
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