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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MXAN_2256Putative thioredoxin; Identified by match to protein family HMM PF00085; match to protein family HMM TIGR01068. (765 aa)    
Predicted Functional Partners:
MXAN_2257
FHA domain protein; Identified by match to protein family HMM PF00498.
  
    0.774
MXAN_0362
Putative pilus biogenesis operon protein.
  
     0.626
MXAN_0536
Hypothetical protein; Identified by Glimmer2; putative.
 
     0.611
MXAN_6935
Conserved hypothetical protein; Identified by match to protein family HMM PF00582.
  
 
 0.609
MXAN_0829
Putative lipoprotein.
  
    0.603
MXAN_1790
ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005.
 
    0.597
MXAN_1353
Hypothetical protein; Identified by Glimmer2; putative.
  
     0.589
MXAN_0277
Putative membrane protein.
 
     0.585
MXAN_7466
Hypothetical protein; Identified by Glimmer2; putative.
  
     0.585
MXAN_6885
Hypothetical protein; Identified by Glimmer2; putative.
  
     0.572
Your Current Organism:
Myxococcus xanthus
NCBI taxonomy Id: 246197
Other names: M. xanthus DK 1622, Myxococcus xanthus DK 1622
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