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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MXAN_2267Oxidoreductase, 2-nitropropane dioxygenase family; Identified by match to protein family HMM PF00478; match to protein family HMM PF03060. (357 aa)    
Predicted Functional Partners:
MXAN_0483
Oxidoreductase, 2-nitropropane dioxygenase family; Identified by match to protein family HMM PF00478; match to protein family HMM PF03060.
  
  
 
0.929
MXAN_5559
Putative nitrate reductase, gamma subunit.
    
  0.903
MXAN_2209
Putative cytochrome c nitrite reductase, catalytic subunit NrfA; Identified by similarity to GB:CAB53160.1; match to protein family HMM PF02335; Belongs to the cytochrome c-552 family.
     
  0.900
MXAN_2210
Putative cytochrome c nitrite reductase, small subunit NrfH; Identified by similarity to GB:CAB53159.1.
     
  0.900
MXAN_2954
Iron-sulfur cluster-binding protein, Rieske family; Identified by match to protein family HMM PF00355.
     
  0.900
pstC
Phosphate ABC transporter, permease protein PstC; Part of the binding-protein-dependent transport system for phosphate; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily.
      
 0.764
MXAN_3462
Polyketide synthase type I; Identified by match to protein family HMM PF00106; match to protein family HMM PF00109; match to protein family HMM PF00698; match to protein family HMM PF02801.
  
 
 0.762
pstS
Phosphate ABC transporter, periplasmic phosphate-binding protein; Identified by match to protein family HMM PF01547; match to protein family HMM TIGR02136.
      
 0.762
pstB
Phosphate ABC transporter, ATP-binding protein; Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphate importer (TC 3.A.1.7) family.
      
 0.701
glgE
Conserved hypothetical protein; Maltosyltransferase that uses maltose 1-phosphate (M1P) as the sugar donor to elongate linear or branched alpha-(1->4)-glucans. Is involved in a branched alpha-glucan biosynthetic pathway from trehalose, together with TreS, Mak and GlgB.
   
  
 0.697
Your Current Organism:
Myxococcus xanthus
NCBI taxonomy Id: 246197
Other names: M. xanthus DK 1622, Myxococcus xanthus DK 1622
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