STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MXAN_2288Glycosyl hydrolase, family 18; Identified by match to protein family HMM PF00041; match to protein family HMM PF00704; Belongs to the glycosyl hydrolase 18 family. (546 aa)    
Predicted Functional Partners:
MXAN_6008
Chitinase, class II; Identified by similarity to GB:AAK69033.1; match to protein family HMM PF00041; match to protein family HMM PF00704; match to protein family HMM PF02839.
0.972
MXAN_4534
Chitinase, class I; Identified by match to protein family HMM PF00182; match to protein family HMM PF00652.
  
  
 0.957
MXAN_2927
Glycosyl hydrolase, family 18; Identified by match to protein family HMM PF00704; match to protein family HMM PF02839; Belongs to the glycosyl hydrolase 18 family.
 
  
 
0.930
MXAN_1630
Putative chitinase; Identified by similarity to GB:AAP04616.1; match to protein family HMM PF00704; Belongs to the glycosyl hydrolase 18 family.
  
  
 
0.909
MXAN_6621
Identified by match to protein family HMM PF00933.
   
 
 0.908
MXAN_2042
Phosphotransferase; Identified by match to protein family HMM PF01636.
     
  0.900
MXAN_3462
Polyketide synthase type I; Identified by match to protein family HMM PF00106; match to protein family HMM PF00109; match to protein family HMM PF00698; match to protein family HMM PF02801.
  
 
 
 0.647
thiD
Phosphomethylpyrimidine kinase; Identified by match to protein family HMM TIGR00097.
       0.645
MXAN_7466
Hypothetical protein; Identified by Glimmer2; putative.
  
     0.641
MXAN_2353
Putative oligopeptide transporter; Identified by match to protein family HMM PF03169.
  
     0.580
Your Current Organism:
Myxococcus xanthus
NCBI taxonomy Id: 246197
Other names: M. xanthus DK 1622, Myxococcus xanthus DK 1622
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.