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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MXAN_2322Hypothetical protein; Identified by Glimmer2; putative. (100 aa)    
Predicted Functional Partners:
MXAN_2321
Beta-lactamase; Identified by match to protein family HMM PF00144.
       0.773
MXAN_5000
SPFH domain/band 7 family.
  
     0.659
MXAN_2218
Oxidoreductase, 2OG-Fe(II) oxygenase family; Identified by match to protein family HMM PF03171.
  
     0.648
MXAN_5969
Conserved hypothetical protein.
 
     0.630
MXAN_0621
Conserved hypothetical protein.
  
     0.628
MXAN_6120
Conserved hypothetical protein; Identified by match to protein family HMM TIGR02452.
  
     0.625
MXAN_2323
Outer membrane protein, OMP85 family; Identified by match to protein family HMM PF01103.
  
    0.594
MXAN_5133
Conserved domain protein; Identified by similarity to GB:AAL86957.1.
  
    0.520
MXAN_2891
WGR domain protein; Identified by match to protein family HMM PF05406.
  
     0.499
MXAN_2892
WGR domain protein; Identified by match to protein family HMM PF05406.
  
     0.477
Your Current Organism:
Myxococcus xanthus
NCBI taxonomy Id: 246197
Other names: M. xanthus DK 1622, Myxococcus xanthus DK 1622
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