Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
MXAN_2353Putative oligopeptide transporter; Identified by match to protein family HMM PF03169. (586 aa)    
Predicted Functional Partners:
MXAN_1578
Identified by match to protein family HMM PF00753.
  
     0.758
MXAN_4279
Putative helicase; Identified by match to protein family HMM PF00271.
  
     0.747
MXAN_7193
Hypothetical protein; Identified by Glimmer2; putative.
  
     0.725
MXAN_1591
Hypothetical protein; Identified by Glimmer2; putative.
 
     0.717
MXAN_0621
Conserved hypothetical protein.
  
     0.715
MXAN_6930
Hypothetical protein; Identified by Glimmer2; putative.
  
     0.703
MXAN_3999
Putative N-acetylmuramoyl-L-alanine amidase; Identified by match to protein family HMM PF01520.
  
     0.699
MXAN_1003
Tat (twin-arginine translocation) pathway signal sequence domain protein; Identified by match to protein family HMM TIGR01409.
  
     0.674
MXAN_2936
Putative lipoprotein.
  
     0.623
MXAN_0679
Hypothetical protein; Identified by Glimmer2; putative.
  
     0.622
Your Current Organism:
Myxococcus xanthus
NCBI taxonomy Id: 246197
Other names: M. xanthus DK 1622, Myxococcus xanthus DK 1622
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