STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MXAN_2356Conserved hypothetical protein; Identified by similarity to GB:CAC04039.1. (272 aa)    
Predicted Functional Partners:
MXAN_5839
Peptidase, U32 family; Identified by match to protein family HMM PF01136.
  
  
 0.627
MXAN_4160
Hypothetical protein; Identified by Glimmer2; putative.
  
    0.603
MXAN_2355
Putative membrane protein.
       0.545
MXAN_2357
Conserved domain protein; Identified by similarity to GB:BAC72571.1.
     
 0.526
MXAN_3779
Non-ribosomal peptide synthetase/polyketide synthase; Identified by similarity to GB:AAF15891.2; match to protein family HMM PF00109; match to protein family HMM PF00296; match to protein family HMM PF00501; match to protein family HMM PF00550; match to protein family HMM PF00668; match to protein family HMM PF00698; match to protein family HMM PF00975; match to protein family HMM PF02801; match to protein family HMM TIGR01733.
  
 
 0.520
MXAN_5370
Putative lipoprotein.
  
     0.508
MXAN_3932
Polyketide synthase; Identified by match to protein family HMM PF00106; match to protein family HMM PF00107; match to protein family HMM PF00109; match to protein family HMM PF00550; match to protein family HMM PF00975; match to protein family HMM PF02801.
  
 
 0.505
MXAN_2885
Conserved hypothetical protein; Identified by similarity to GB:BAC70327.1.
 
     0.490
MXAN_4955
Conserved hypothetical protein; Identified by similarity to SP:Q9A4D0; match to protein family HMM PF05114.
   
    0.480
MXAN_2754
Peptidase, M4 (thermolysin) family; Identified by similarity to SP:P05806; similarity to GB:AAB62279.1; match to protein family HMM PF01447; match to protein family HMM PF01483; match to protein family HMM PF02868; match to protein family HMM PF03413; match to protein family HMM PF07504.
  
     0.456
Your Current Organism:
Myxococcus xanthus
NCBI taxonomy Id: 246197
Other names: M. xanthus DK 1622, Myxococcus xanthus DK 1622
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.