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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MXAN_2390Conserved hypothetical protein; Identified by similarity to GB:BAC90431.1. (339 aa)    
Predicted Functional Partners:
rpiA
Ribose-5-phosphate isomerase; Catalyzes the reversible conversion of ribose-5-phosphate to ribulose 5-phosphate.
  
    0.616
MXAN_0453
Putative general stress protein 26; Identified by similarity to SP:P80238; match to protein family HMM PF01243.
  
    0.612
MXAN_1546
Conserved hypothetical protein; Identified by similarity to GB:CAG35984.1; match to protein family HMM PF01073; match to protein family HMM PF01370; match to protein family HMM PF07993; match to protein family HMM TIGR01777.
  
    0.597
MXAN_6937
Identified by match to protein family HMM PF05532; Belongs to the UPF0337 (CsbD) family.
  
    0.590
MXAN_0892
NAD dependent epimerase/dehydratase family protein; Identified by match to protein family HMM PF01073; match to protein family HMM PF01370; match to protein family HMM PF07993; match to protein family HMM TIGR01777.
  
    0.585
MXAN_2389
Identified by match to protein family HMM PF00255; Belongs to the glutathione peroxidase family.
  
    0.577
MXAN_0298
Hypothetical protein; Identified by Glimmer2; putative.
   
    0.563
MXAN_0293
Conserved hypothetical protein.
 
   
 0.511
MXAN_6243
Conserved hypothetical protein; Identified by similarity to GB:BAB51820.1; match to protein family HMM PF06983.
  
    0.491
uvrA
UvrABC system, A protein; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate.
       0.487
Your Current Organism:
Myxococcus xanthus
NCBI taxonomy Id: 246197
Other names: M. xanthus DK 1622, Myxococcus xanthus DK 1622
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