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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MXAN_2449FliR/MopE/SpaR family protein; Identified by similarity to SP:P35537; match to protein family HMM PF01311. (272 aa)    
Predicted Functional Partners:
MXAN_2445
Type III secretion system apparatus protein YscQ/HrcQ; Identified by match to protein family HMM PF01052; match to protein family HMM TIGR02551.
 
 
 0.997
fliQ
FliQ/MopD/SpaQ family protein; Role in flagellar biosynthesis. Belongs to the FliQ/MopD/SpaQ family.
 
 
 0.995
MXAN_2450
Identified by similarity to SP:P35538; match to protein family HMM PF01312.
 
 0.992
MXAN_2451
FlhB/HrpN/YscU/SpaS family protein.
 
 
 0.984
MXAN_5646
Putative type III secretion system protein; Identified by similarity to SP:P35535; match to protein family HMM PF01313.
 
 
 0.980
MXAN_5649
Type III secretion system apparatus protein YscQ/HrcQ; Identified by match to protein family HMM PF01052; match to protein family HMM TIGR02551.
  
 
 0.978
MXAN_5644
Type III secretion protein, FlhB/HrpN/YscU/SpaS family; Identified by match to protein family HMM PF01312.
 
 0.975
MXAN_2442
ATPase, FliI/YscN family; Identified by similarity to SP:P23445; similarity to SP:P40290; match to protein family HMM PF00006; match to protein family HMM PF02874; match to protein family HMM TIGR01026; match to protein family HMM TIGR02546.
 
  
 0.964
MXAN_2447
Identified by match to protein family HMM PF00813; match to protein family HMM TIGR01102.
 
   
 0.944
MXAN_2446
Hypothetical protein; Identified by Glimmer2; putative.
  
  
 0.922
Your Current Organism:
Myxococcus xanthus
NCBI taxonomy Id: 246197
Other names: M. xanthus DK 1622, Myxococcus xanthus DK 1622
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