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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MXAN_2463Type III secretion protein LcrD/AscV; Identified by similarity to GB:AAA27643.1; similarity to GB:CAD30218.1; match to protein family HMM PF00771; match to protein family HMM TIGR01399. (707 aa)    
Predicted Functional Partners:
MXAN_5645
Bacterial export protein, FliR/MopE/SpaR family; This family includes proteins involved in type III secretion and flagellar biosynthesis; identified by match to protein family HMM PF01311.
 
 
 0.950
MXAN_2447
Identified by match to protein family HMM PF00813; match to protein family HMM TIGR01102.
 
 
 0.935
MXAN_5647
Type III secretion apparatus protein YscR/HrcR; Identified by match to protein family HMM PF00813; match to protein family HMM TIGR01102.
 
 
 0.935
MXAN_2445
Type III secretion system apparatus protein YscQ/HrcQ; Identified by match to protein family HMM PF01052; match to protein family HMM TIGR02551.
 
  
 0.926
MXAN_2442
ATPase, FliI/YscN family; Identified by similarity to SP:P23445; similarity to SP:P40290; match to protein family HMM PF00006; match to protein family HMM PF02874; match to protein family HMM TIGR01026; match to protein family HMM TIGR02546.
 
  
 0.914
MXAN_5643
Type III secretion protein, FHIPEP family; The FHIPEP (Flagellar/Hr/Invasion Proteins Export Pore) family consists of a number of inner membrane proteins of the type III secretion pathway; identified by similarity to GB:CAD30218.1; match to protein family HMM PF00771.
  
  
 
0.907
MXAN_2450
Identified by similarity to SP:P35538; match to protein family HMM PF01312.
 
 
 0.868
MXAN_2451
FlhB/HrpN/YscU/SpaS family protein.
 
 
 0.866
MXAN_5644
Type III secretion protein, FlhB/HrpN/YscU/SpaS family; Identified by match to protein family HMM PF01312.
 
 
 0.866
MXAN_2439
Type III secretion apparatus lipoprotein, YscJ/HrcJ family; Identified by similarity to GB:AAK81934.1; match to protein family HMM PF01514.
 
 
 0.849
Your Current Organism:
Myxococcus xanthus
NCBI taxonomy Id: 246197
Other names: M. xanthus DK 1622, Myxococcus xanthus DK 1622
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