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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MXAN_2502Hypothetical protein; Identified by Glimmer2; putative. (322 aa)    
Predicted Functional Partners:
MXAN_2503
Hypothetical protein; Identified by Glimmer2; putative.
       0.803
MXAN_2504
Putative general secretion pathway protein L.
       0.803
MXAN_2505
Putative general secretory pathway protein K.
       0.803
MXAN_2506
Putative general secretion pathway protein J; Identified by match to protein family HMM PF07963; match to protein family HMM TIGR02532.
       0.801
MXAN_2507
Type II secretion operon protein; Identified by match to protein family HMM PF07963; match to protein family HMM TIGR02532.
       0.799
MXAN_2508
Prepilin-type N-terminal cleavage/methylation domain protein; Identified by match to protein family HMM PF07963; match to protein family HMM TIGR02532.
       0.778
MXAN_2509
Conserved hypothetical protein.
       0.778
gspG
General secretion pathway protein G; Identified by similarity to GB:AAD05177.1; match to protein family HMM PF07963; match to protein family HMM TIGR01710; match to protein family HMM TIGR02532.
       0.684
gspF
General secretion pathway protein F; Identified by similarity to GB:AAD05175.1; match to protein family HMM PF00482; match to protein family HMM TIGR02120.
       0.544
MXAN_2501
Sigma-54 dependent transcriptional regulator, Fis family; Identified by match to protein family HMM PF00158; match to protein family HMM PF00498; match to protein family HMM PF02954; match to protein family HMM TIGR01199.
       0.528
Your Current Organism:
Myxococcus xanthus
NCBI taxonomy Id: 246197
Other names: M. xanthus DK 1622, Myxococcus xanthus DK 1622
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