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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pkn6Serine/threonine protein kinase Pkn6; Identified by similarity to SP:P54738; match to protein family HMM PF00069. (710 aa)    
Predicted Functional Partners:
MXAN_4398
Protein phosphatase/cyclic nucleotide-binding domain protein; Identified by match to protein family HMM PF00027; match to protein family HMM PF00481.
 
 
 0.806
pph1
Protein phosphatase 1; Identified by similarity to GB:AAF81068.1; match to protein family HMM PF00481.
 
   0.804
MXAN_5349
Serine/threonine protein phosphatase, 2C family; Identified by similarity to GB:AAF81068.1; match to protein family HMM PF00481.
   0.804
MXAN_1412
Putative serine/threonine protein phosphatase; Identified by similarity to GB:AAF81068.1; match to protein family HMM PF00481.
 
   0.796
MXAN_7269
Putative serine/threonine protein kinase; Identified by match to protein family HMM PF00069.
  
     0.775
pkn5
Serine/threonine protein kinase Pkn5; Identified by similarity to SP:P54737; match to protein family HMM PF00069.
 
   
0.766
MXAN_2548
Pseudouridine synthase, RluA family; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family.
       0.533
MXAN_5591
FHA domain/tetratricopeptide repeat protein; Identified by match to protein family HMM PF00498; match to protein family HMM PF07719.
  
 
   0.442
pkn8
Serine/threonine kinase PKN8; Identified by similarity to SP:P33973; match to protein family HMM PF00069; match to protein family HMM PF00515; match to protein family HMM PF07719; match to protein family HMM PF07721.
  
  
0.407
MXAN_1361
FHA domain protein; Identified by match to protein family HMM PF00498.
  
 
   0.406
Your Current Organism:
Myxococcus xanthus
NCBI taxonomy Id: 246197
Other names: M. xanthus DK 1622, Myxococcus xanthus DK 1622
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