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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MXAN_2575Putative lipoprotein. (139 aa)    
Predicted Functional Partners:
MXAN_2576
Putative membrane protein.
  
    0.777
MXAN_2577
Peptidase, M61 (glycyl aminopeptidase) family; Identified by match to protein family HMM PF00595; match to protein family HMM PF05299.
       0.762
MXAN_2578
Methyltransferase, RsmB/NOP family; Identified by match to protein family HMM PF01189; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family.
       0.669
MXAN_2579
metallophosphoesterase/PKD domain protein; Identified by match to protein family HMM PF00149; match to protein family HMM PF00801.
       0.434
rnhB
Ribonuclease HII; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids; Belongs to the RNase HII family.
  
    0.428
MXAN_2573
Hypothetical protein; Identified by Glimmer2; putative.
       0.414
Your Current Organism:
Myxococcus xanthus
NCBI taxonomy Id: 246197
Other names: M. xanthus DK 1622, Myxococcus xanthus DK 1622
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