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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MXAN_2615Acetyltransferase, GNAT family; Identified by match to protein family HMM PF00583. (273 aa)    
Predicted Functional Partners:
MXAN_2614
Identified by match to protein family HMM PF01569.
       0.553
MXAN_2706
Conserved hypothetical protein; Identified by similarity to GB:AAS70461.1; match to protein family HMM PF00561.
  
     0.550
MXAN_4589
Hypothetical protein; Identified by Glimmer2; putative.
  
     0.532
rplM
Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.
 
      0.517
MXAN_6543
Identified by match to protein family HMM PF00149.
  
    0.504
MXAN_2617
ATP-dependent DNA helicase, UvrD/REP family; Identified by match to protein family HMM PF00580; Belongs to the helicase family. UvrD subfamily.
  
  
 0.490
MXAN_2616
Hypothetical protein; Identified by Glimmer2; putative.
       0.467
purA
Adenylosuccinate synthetase; Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP; Belongs to the adenylosuccinate synthetase family.
  
    0.465
MXAN_1123
Putative S-adenosyl-L-methionine: L-methionine S-methyltransferase; Identified by similarity to GB:AAD49573.1; match to protein family HMM PF00155.
 
   
 0.448
MXAN_1978
Hypothetical protein; Identified by Glimmer2; putative.
  
     0.443
Your Current Organism:
Myxococcus xanthus
NCBI taxonomy Id: 246197
Other names: M. xanthus DK 1622, Myxococcus xanthus DK 1622
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