STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MXAN_2617ATP-dependent DNA helicase, UvrD/REP family; Identified by match to protein family HMM PF00580; Belongs to the helicase family. UvrD subfamily. (1220 aa)    
Predicted Functional Partners:
MXAN_2616
Hypothetical protein; Identified by Glimmer2; putative.
 
 
 0.997
MXAN_1109
Conserved hypothetical protein; Identified by similarity to GB:CAD85725.1.
 
 
 0.783
purA
Adenylosuccinate synthetase; Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP; Belongs to the adenylosuccinate synthetase family.
       0.773
MXAN_5284
Conserved hypothetical protein; Identified by similarity to GB:CAC22731.1.
 
 
 0.766
MXAN_6419
Tetratricopeptide repeat protein; Identified by match to protein family HMM PF00515; match to protein family HMM PF07719.
 
    0.717
MXAN_2010
Phage recombination protein Bet; Identified by match to protein family HMM PF03837; match to protein family HMM TIGR01913.
 
  
 0.694
MXAN_4396
Hypothetical protein; Identified by Glimmer2; putative.
  
     0.685
MXAN_6423
Putative membrane protein.
  
    0.679
MXAN_2619
Tetratricopeptide repeat protein; Identified by match to protein family HMM PF00515; match to protein family HMM PF07719; match to protein family HMM PF07721.
       0.642
MXAN_0634
Hypothetical protein; Identified by Glimmer2; putative.
  
     0.641
Your Current Organism:
Myxococcus xanthus
NCBI taxonomy Id: 246197
Other names: M. xanthus DK 1622, Myxococcus xanthus DK 1622
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.