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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MXAN_2622Conserved hypothetical protein; Identified by similarity to GB:CAD78353.1. (256 aa)    
Predicted Functional Partners:
MXAN_2621
FHA domain protein; Identified by match to protein family HMM PF00498.
       0.757
prtB
Identified by similarity to GB:CAA71521.1.
  
     0.524
MXAN_0807
Conserved hypothetical protein; Identified by similarity to PIR:B95852.
  
     0.519
MXAN_2221
Peptidase, M27 (PrtB) family; Identified by similarity to GB:CAA71521.1.
  
     0.496
MXAN_4883
Conserved hypothetical protein.
  
    0.494
speE
Spermine/spermidine synthase family protein; Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy-AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine.
  
     0.486
MXAN_2623
Conserved domain protein; Identified by similarity to GB:CAD96242.1.
       0.468
MXAN_2624
Putative lipoprotein.
 
     0.428
Your Current Organism:
Myxococcus xanthus
NCBI taxonomy Id: 246197
Other names: M. xanthus DK 1622, Myxococcus xanthus DK 1622
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