STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MXAN_2639Conserved hypothetical protein; Identified by similarity to GB:AAR34003.1. (245 aa)    
Predicted Functional Partners:
MXAN_2637
Hypothetical protein; Identified by Glimmer2; putative.
 
    0.908
MXAN_2638
Hypothetical protein; Identified by Glimmer2; putative.
 
    0.885
MXAN_4870
Tetratricopeptide repeat protein; Identified by match to protein family HMM PF07719.
  
     0.722
MXAN_3374
Tetratricopeptide repeat protein; Identified by match to protein family HMM PF07719.
  
    0.692
aglU
Adventurous gliding motility protein AglU; Identified by similarity to GB:AAO22920.1.
  
     0.662
MXAN_1395
Hypothetical protein; Identified by Glimmer2; putative.
  
     0.661
MXAN_2922
Bacterial sugar transferase; Identified by match to protein family HMM PF02397; match to protein family HMM PF02629.
 
  
 0.634
MXAN_3550
Hypothetical protein; Identified by Glimmer2; putative.
  
 
   0.607
MXAN_5975
Putative lipoprotein.
  
     0.590
MXAN_2707
Hypothetical protein; Identified by Glimmer2; putative.
  
     0.587
Your Current Organism:
Myxococcus xanthus
NCBI taxonomy Id: 246197
Other names: M. xanthus DK 1622, Myxococcus xanthus DK 1622
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.