STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
glpGlycerol 3-phosphate permease; Identified by similarity to SP:P37948; match to protein family HMM PF07690. (487 aa)    
Predicted Functional Partners:
MXAN_6961
PBS lyase HEAT-like repeat protein; Identified by match to protein family HMM PF02985; match to protein family HMM PF03130.
  
     0.704
MXAN_2319
Conserved hypothetical protein; Identified by similarity to GB:CAD76353.1.
  
     0.678
MXAN_6790
Conserved hypothetical protein.
  
  
 0.647
MXAN_0886
Metal dependent amidohydrolase; Identified by match to protein family HMM PF01979; match to protein family HMM PF02412; match to protein family HMM TIGR01451; match to protein family HMM TIGR02232.
 
     0.644
MXAN_1665
Conserved domain protein; Identified by similarity to GB:AAM35405.1.
  
     0.596
MXAN_7114
ABC transporter, periplasmic substrate-binding protein; Identified by match to protein family HMM PF01547.
  
  
 0.571
MXAN_0805
Peptidase, M10A/M12A subfamilies; Identified by match to protein family HMM PF00413; match to protein family HMM PF04151.
  
     0.564
MXAN_2664
Hypothetical protein; Identified by Glimmer2; putative.
       0.563
MXAN_6741
Albicidin resistance domain protein.
 
  
 0.562
glpK
Glycerol kinase; Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate; Belongs to the FGGY kinase family.
  
  
 0.559
Your Current Organism:
Myxococcus xanthus
NCBI taxonomy Id: 246197
Other names: M. xanthus DK 1622, Myxococcus xanthus DK 1622
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.