STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MXAN_2697HAD-superfamily hydrolase, subfamily IA, variant 3; Identified by match to protein family HMM PF00702; match to protein family HMM TIGR01509; match to protein family HMM TIGR01549. (229 aa)    
Predicted Functional Partners:
MXAN_5940
Putative iron-sulfur cluster binding protein; Identified by match to protein family HMM PF00037.
      0.801
MXAN_2696
Hypothetical protein; Identified by Glimmer2; putative.
       0.714
MXAN_2698
Identified by match to protein family HMM PF00378.
     
 0.567
MXAN_3677
Major facilitator family transporter; Identified by match to protein family HMM PF07690.
  
  
 0.522
MXAN_5378
Putative sugar ABC transporter, permease protein/periplasmic sugar-binding protein; Identified by similarity to SP:P26467; match to protein family HMM PF00528; match to protein family HMM PF01547.
  
  
 0.512
pfkB
6-phosphofructokinase; Identified by similarity to SP:P06999; match to protein family HMM PF00294; Belongs to the carbohydrate kinase PfkB family.
 
    0.503
rpmB
Ribosomal protein L28; Identified by similarity to SP:P37807; match to protein family HMM PF00830; match to protein family HMM TIGR00009; Belongs to the bacterial ribosomal protein bL28 family.
       0.494
otsAB
Alpha,alpha-trehalose-phosphate synthase/trehalose-phosphatase; Identified by match to protein family HMM PF00982; match to protein family HMM PF02358; match to protein family HMM TIGR00685; match to protein family HMM TIGR01484.
     
 0.462
pgi
Glucose-6-phosphate isomerase; Identified by match to protein family HMM PF00342.
 
  
 0.462
MXAN_5892
Identified by match to protein family HMM PF01263.
 
  
 0.446
Your Current Organism:
Myxococcus xanthus
NCBI taxonomy Id: 246197
Other names: M. xanthus DK 1622, Myxococcus xanthus DK 1622
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