close STRING v12.5 is now available!
The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MXAN_2709Putative transcriptional regulator; Identified by similarity to SP:P06153; match to protein family HMM PF01381. (116 aa)    
Predicted Functional Partners:
lptD
Putative organic solvent tolerance protein; Involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane; Belongs to the LptD family.
     
 0.593
MXAN_2707
Hypothetical protein; Identified by Glimmer2; putative.
 
     0.576
MXAN_2710
Putative lipoprotein.
       0.518
MXAN_2711
Transcriptional regulator, TetR family; Identified by match to protein family HMM PF00440.
 
     0.495
folC
Tetrahydrofolylpolyglutamate synthase/dihydrofolate synthase; Identified by similarity to SP:P15925; match to protein family HMM PF02875; match to protein family HMM TIGR01499; Belongs to the folylpolyglutamate synthase family.
     
 0.466
MXAN_2706
Conserved hypothetical protein; Identified by similarity to GB:AAS70461.1; match to protein family HMM PF00561.
       0.452
MXAN_4148
Putative transmembrane regulator PrtR.
  
  
 0.417
Your Current Organism:
Myxococcus xanthus
NCBI taxonomy Id: 246197
Other names: M. xanthus DK 1622, Myxococcus xanthus DK 1622
Server load: low (32%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.