MXAN_2751 protein (Myxococcus xanthus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

MXAN_2751

Hypothetical protein; Identified by Glimmer2; putative. (68 aa)

Predicted Functional Partners:

MXAN_2750

0.937

MXAN_2445

0.876

MXAN_5649

0.876

MXAN_2749

0.833

MXAN_5613

0.832

MXAN_2317

0.808

MXAN_3362

0.754

MXAN_2441

0.588

MXAN_6735

0.568

MXAN_2109

0.565

Your Current Organism:

Myxococcus xanthus

NCBI taxonomy Id: 246197
Other names: M. xanthus DK 1622, Myxococcus xanthus DK 1622

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
MXAN_2109	MXAN_2317	Hyalin repeat protein; Identified by match to protein family HMM PF02494.	Sensory box histidine kinase/response regulator; Identified by match to protein family HMM PF00072; match to protein family HMM PF00512; match to protein family HMM PF00989; match to protein family HMM PF01627; match to protein family HMM PF02518; match to protein family HMM TIGR00229.	0.590
MXAN_2109	MXAN_2441	Hyalin repeat protein; Identified by match to protein family HMM PF02494.	FliH family protein.	0.860
MXAN_2109	MXAN_2445	Hyalin repeat protein; Identified by match to protein family HMM PF02494.	Type III secretion system apparatus protein YscQ/HrcQ; Identified by match to protein family HMM PF01052; match to protein family HMM TIGR02551.	0.986
MXAN_2109	MXAN_2749	Hyalin repeat protein; Identified by match to protein family HMM PF02494.	ATPase; Identified by match to protein family HMM PF02518.	0.590
MXAN_2109	MXAN_2750	Hyalin repeat protein; Identified by match to protein family HMM PF02494.	Putative serine/threonine protein kinase; Identified by similarity to SP:P42411; match to protein family HMM PF02518.	0.590
MXAN_2109	MXAN_2751	Hyalin repeat protein; Identified by match to protein family HMM PF02494.	Hypothetical protein; Identified by Glimmer2; putative.	0.565
MXAN_2109	MXAN_3362	Hyalin repeat protein; Identified by match to protein family HMM PF02494.	Hypothetical protein; Identified by Glimmer2; putative.	0.696
MXAN_2109	MXAN_5613	Hyalin repeat protein; Identified by match to protein family HMM PF02494.	Putative anti-sigma factor antagonist; Identified by match to protein family HMM PF01740.	0.829
MXAN_2109	MXAN_5649	Hyalin repeat protein; Identified by match to protein family HMM PF02494.	Type III secretion system apparatus protein YscQ/HrcQ; Identified by match to protein family HMM PF01052; match to protein family HMM TIGR02551.	0.986
MXAN_2109	MXAN_6735	Hyalin repeat protein; Identified by match to protein family HMM PF02494.	Sensor histidine kinase/response regulator; Identified by match to protein family HMM PF00072; match to protein family HMM PF00512; match to protein family HMM PF00672; match to protein family HMM PF01590; match to protein family HMM PF02518.	0.780
MXAN_2317	MXAN_2109	Sensory box histidine kinase/response regulator; Identified by match to protein family HMM PF00072; match to protein family HMM PF00512; match to protein family HMM PF00989; match to protein family HMM PF01627; match to protein family HMM PF02518; match to protein family HMM TIGR00229.	Hyalin repeat protein; Identified by match to protein family HMM PF02494.	0.590
MXAN_2317	MXAN_2441	Sensory box histidine kinase/response regulator; Identified by match to protein family HMM PF00072; match to protein family HMM PF00512; match to protein family HMM PF00989; match to protein family HMM PF01627; match to protein family HMM PF02518; match to protein family HMM TIGR00229.	FliH family protein.	0.612
MXAN_2317	MXAN_2445	Sensory box histidine kinase/response regulator; Identified by match to protein family HMM PF00072; match to protein family HMM PF00512; match to protein family HMM PF00989; match to protein family HMM PF01627; match to protein family HMM PF02518; match to protein family HMM TIGR00229.	Type III secretion system apparatus protein YscQ/HrcQ; Identified by match to protein family HMM PF01052; match to protein family HMM TIGR02551.	0.952
MXAN_2317	MXAN_2749	Sensory box histidine kinase/response regulator; Identified by match to protein family HMM PF00072; match to protein family HMM PF00512; match to protein family HMM PF00989; match to protein family HMM PF01627; match to protein family HMM PF02518; match to protein family HMM TIGR00229.	ATPase; Identified by match to protein family HMM PF02518.	0.836
MXAN_2317	MXAN_2750	Sensory box histidine kinase/response regulator; Identified by match to protein family HMM PF00072; match to protein family HMM PF00512; match to protein family HMM PF00989; match to protein family HMM PF01627; match to protein family HMM PF02518; match to protein family HMM TIGR00229.	Putative serine/threonine protein kinase; Identified by similarity to SP:P42411; match to protein family HMM PF02518.	0.837
MXAN_2317	MXAN_2751	Sensory box histidine kinase/response regulator; Identified by match to protein family HMM PF00072; match to protein family HMM PF00512; match to protein family HMM PF00989; match to protein family HMM PF01627; match to protein family HMM PF02518; match to protein family HMM TIGR00229.	Hypothetical protein; Identified by Glimmer2; putative.	0.808
MXAN_2317	MXAN_3362	Sensory box histidine kinase/response regulator; Identified by match to protein family HMM PF00072; match to protein family HMM PF00512; match to protein family HMM PF00989; match to protein family HMM PF01627; match to protein family HMM PF02518; match to protein family HMM TIGR00229.	Hypothetical protein; Identified by Glimmer2; putative.	0.831
MXAN_2317	MXAN_5613	Sensory box histidine kinase/response regulator; Identified by match to protein family HMM PF00072; match to protein family HMM PF00512; match to protein family HMM PF00989; match to protein family HMM PF01627; match to protein family HMM PF02518; match to protein family HMM TIGR00229.	Putative anti-sigma factor antagonist; Identified by match to protein family HMM PF01740.	0.870
MXAN_2317	MXAN_5649	Sensory box histidine kinase/response regulator; Identified by match to protein family HMM PF00072; match to protein family HMM PF00512; match to protein family HMM PF00989; match to protein family HMM PF01627; match to protein family HMM PF02518; match to protein family HMM TIGR00229.	Type III secretion system apparatus protein YscQ/HrcQ; Identified by match to protein family HMM PF01052; match to protein family HMM TIGR02551.	0.952
MXAN_2317	MXAN_6735	Sensory box histidine kinase/response regulator; Identified by match to protein family HMM PF00072; match to protein family HMM PF00512; match to protein family HMM PF00989; match to protein family HMM PF01627; match to protein family HMM PF02518; match to protein family HMM TIGR00229.	Sensor histidine kinase/response regulator; Identified by match to protein family HMM PF00072; match to protein family HMM PF00512; match to protein family HMM PF00672; match to protein family HMM PF01590; match to protein family HMM PF02518.	0.986